Based on your previous post Unable to disable passthrough ESXi 5.5 , it would look as though you mistakenly enabled passthrough for the Intel SATA controller to which the disk(s) of the datastore is attached. Two Intel USB 2.0 controllers and one ASMedia USB 3.0 controllers were also enabled for passthrough.
What I suggest is to remove the lines in red. These lines don't appear for a storage device that is not enabled for passthrough. You can also remove the other devices if you choose to. Or you could experiment first by removing the lines related to the 1 of the 3 USB controllers. Back up the esxi.conf though because it might end up in an unbootable/unusable state; so it is up to you if you want to try this.
You can use Alt+F1 to get to the ESXi console instead of through SSH just for convenience sake (assuming you have physical access to the console and ESXi console access is enabled).
Intel SATA/AHCI controller
/device/000:000:31.2/owner = "vmkernel"
/device/000:000:31.2/device = "1e02"
/device/000:000:31.2/vmkname = "vmhba0"
/device/000:000:31.2/vendor = "8086"
Intel USB 2.0 controller
/device/000:000:29.0/owner = "vmkernel"
/device/000:000:29.0/device = "1e26"
/device/000:000:29.0/vendor = "8086"
ASMedia USB 3.0 Controller
/device/000:001:00.0/owner = "vmkernel"
/device/000:001:00.0/device = "1142"
/device/000:001:00.0/vendor = "1b21"
Intel USB 2.0 controller
/device/000:000:26.0/owner = "vmkernel"
/device/000:000:26.0/device = "1e2d"
/device/000:000:26.0/vendor = "8086"
Network card
/device/000:000:25.0/vmkname = "vmnic0"